Laboratoire de Biochimie - UMR 7654

· L. Yatime, Y. Mechulam, S. Blanquet E. Schmitt. Structure of an archaeal homotrimericinitiation factor 2 reveals a nucleotide state between the GTP and the GDP states. Proc. Natl. Acad. Sci. USA, (2007), 104, 18445-18450. [Abstract][Full text]

· S. Wydau, M.L. Ferri-Fioni, S. Blanquet, P. Plateau P. GEK1, a gene product of Arabidopsis thaliana involved in ethanol tolerance, is a D-aminoacyl-tRNA deacylase. Nucleic Acids Res. (2007) 35, 930-938. [Abstract][Full text]

· A. Tarze, M. Dauplais, I. Grigoras, M. Lazard M, N.T. Ha-Duong, F. Barbier, S. Blanquet S. Extracellular production of hydrogen selenide accounts for thiol-assisted toxicity of selenite against Saccharomyces cerevisiae. J. Biol. Chem. (2007), in press. [Abstract]

·  J. Noirel & T. Simonson (2007)

 Neutral evolution of protein-protein interactions : a computational study using

 simple models.

 BMC Structural Biology, 7, 79-93

·  D. Thompson, C. Lazennec, P. Plateau & T. Simonson (2007)

 Ammonium scanning in an enzyme active site : the chiral specificity of aspartyl-tRNA

 synthetase.Journal of Biological Chemistry, 282, 30856-30868

· G. Launay, R. Mendez, S. Wodak, T. Simonson (2007)

 Recognizing protein-protein interfaces with empirical potentials and reduced amino

 acid alphabets. BMC Bioinformatics, 8, 270-278

· A. Lopes, A. Alexandrov, C. Bathelt, G. Archontis & T. Simonson (2007) Computational sidechain placement and protein mutagenesis with implicit solvent models Proteins, 67, 853-867

· A. Alexandrov, J. Proft, W. Hinrichs & T. Simonson (2007)

 Protonation patterns in tetracycline:Tet Repressor recognition : simulations and

 experiments. ChemBioChem, 8, 675- 68

Rodrigo G., Montagud A., Aparici A., Aroca M.C., Baguena M., Carrera J., Edo C., Fernandez-De-Cordoba P., Ferrando A., Fuertes G., Gimenez D., Mata C., Medrano J.V., Navarrete C., Navarro E., Salgado J., Tortosa P., Urchueguia J., Jaramillo A. Vanillin cell sensor IET Synthetic Biology, 2007, 1, 74-78.

Rodrigo G., Carrera J., Jaramillo A. Genetdes : Automatic design of transcriptional networks Bioinformatics, 2007, 23, 1857-1858.

Rodrigo G., Carrera J., Jaramillo A. Evolutionary mechanisms of circadian clocks Central European Journal of Biology, 2007, 2, 233-253.

Rodrigo G., Jaramillo A. Computational design of digital and memory biological devices Systems and Synthetic Biology, 2007, 1, 183-195.

Rodrigo G., Carrera J., Jaramillo A. Asmparts : Assembly of biological model parts Systems and Synthetic Biology, 2007, 1, 167-170.